• 
  Joseph Mark Josephides. Genome-wide link between DNA replication and genome instability at the single cell level. Genomics [q-bio.GN]. Université Paris sciences et lettres, 2023. English. ⟨NNT : 2023UPSLS059⟩. ⟨tel-04509017⟩
• 
  Nicolas Jacquelot, Takahiro Yamazaki, Maria Roberti, Connie Duong, Miles Andrews, et al.. Sustained Type I interferon signaling as a mechanism of resistance to PD-1 blockade. Cell Research, 2019, 29 (10), pp.846-861. ⟨10.1038/s41422-019-0224-x⟩. ⟨hal-02461559⟩
• 
  Juliette Mainguené, Sophie Vacher, Maud Kamal, Abderaouf Hamza, Julien Masliah‐planchon, et al.. Human papilloma virus integration sites and genomic signatures in head and neck squamous cell carcinoma. Molecular Oncology, 2022, 16, pp.3001 - 3016. ⟨10.1002/1878-0261.13219⟩. ⟨hal-04459250⟩
• 
  Anvita Bhargava, Ugo Szachnowski, Maxime Chazal, Dominika Foretek, Vincent Caval, et al.. Transcriptomic analysis of sorted lung cells revealed a proviral activity of the NF-κB pathway toward SARS-CoV-2. iScience, 2023, 26 (12), pp.108449. ⟨10.1016/j.isci.2023.108449⟩. ⟨pasteur-04455549⟩
• 
  Carine Rossé, Catalina Lodillinsky, Laetitia Fuhrmann, Maya Nourieh, Pedro Monteiro, et al.. Control of MT1-MMP transport by atypical PKC during breast-cancer progression. Proceedings of the National Academy of Sciences of the United States of America, 2014, 111 (18), pp.E1872 - E1879. ⟨10.1073/pnas.1400749111⟩. ⟨hal-01712228⟩
• 
  Valentina Mengoli, Ilaria Ceppi, Aurore Sanchez, Elda Cannavo, Swagata Halder, et al.. WRN helicase and mismatch repair complexes independently and synergistically disrupt cruciform DNA structures. EMBO Journal, 2022, 42 (3), ⟨10.15252/embj.2022111998⟩. ⟨hal-04305301⟩
• 
  Chenyu Ma, Chunyan Li, Huijing Ma, Daqi Yu, Yufei Zhang, et al.. Pan-cancer surveys indicate cell cycle-related roles of primate-specific genes in tumors and embryonic cerebrum. Genome Biology, 2022, 23 (1), pp.251. ⟨10.1186/s13059-022-02821-9⟩. ⟨hal-04304197⟩
• 
  Maxime Wery, Ugo Szachnowski, Sara Andjus, Alvaro de Andres-Pablo, Antonin Morillon. The RNA helicases Dbp2 and Mtr4 regulate the expression of Xrn1-sensitive long non-coding RNAs in yeast. Frontiers in RNA Research, 2023, 1, ⟨10.3389/frnar.2023.1244554⟩. ⟨hal-04279426⟩
• 
  Carlo Yague-Sanz, Valérie Migeot, Marc Larochelle, François Bachand, Maxime Wéry, et al.. Chromatin remodeling by Pol II primes efficient Pol III transcription. Nature Communications, 2023, 14 (1), pp.3587. ⟨10.1038/s41467-023-39387-4⟩. ⟨hal-04279461⟩
• 
  Sylvain Legrand, Asma Saifudeen, Hélène Bordelet, Julien Vernerey, Arnaud Guille, et al.. Absence of chromosome axis proteins recruitment prevents meiotic recombination chromosome-wide in the budding yeast Lachancea kluyveri. 2023. ⟨hal-04300727⟩
• 
  Yoann Nicolas, Hélène Bret, Elda Cannavo, Petr Cejka, Valerie Borde, et al.. Molecular insights into the activation of Mre11-Rad50 endonuclease activity by Sae2/CtIP. 2023. ⟨hal-04300653⟩
• 
  Alexandra Pyatnitskaya, Jessica Andreani, Raphaël Guérois, Arnaud de Muyt, Valérie Borde. The Zip4 protein directly couples meiotic crossover formation to synaptonemal complex assembly. Genes and Development, 2022, 36 (1-2), pp.53-69. ⟨10.1101/gad.348973.121⟩. ⟨hal-04300601⟩
• 
  Nilushi de Silva, Johan Siewiera, Chantal Alkhoury, Guilherme Nader, Francesca Nadalin, et al.. Nuclear envelope disruption triggers hallmarks of aging in lung alveolar macrophages. Nature Aging, 2023, 3 (10), pp.1251-1268. ⟨10.1038/s43587-023-00488-w⟩. ⟨hal-04290463⟩
• 
  Xia Wu, Yaqun Liu, Yves D’aubenton-Carafa, Claude Thermes, Olivier Hyrien, et al.. Genome-wide measurement of DNA replication fork directionality and quantification of DNA replication initiation and termination with Okazaki fragment sequencing. Nature Protocols, 2023, 18 (4), pp.1260-1295. ⟨10.1038/s41596-022-00793-5⟩. ⟨hal-04265334⟩
• 
  Jeanne Rakotopare, Franck Toledo. p53 in the Molecular Circuitry of Bone Marrow Failure Syndromes. International Journal of Molecular Sciences, 2023, 24 (19), pp.14940. ⟨10.3390/ijms241914940⟩. ⟨hal-04265133⟩
• 
  Jeanne Rakotopare, Vincent Lejour, Carla Duval, Eliana Eldawra, Hugues Escoffier, et al.. A systematic approach identifies p53-DREAM pathway target genes associated with blood or brain abnormalities. Disease Models & Mechanisms, 2023, 16 (10), ⟨10.1242/dmm.050376⟩. ⟨hal-04265058⟩
• 
  Sara Andjus. Role of translation in the degradation of antisense long non-coding RNAs in yeast. Genomics [q-bio.GN]. Université Paris sciences et lettres, 2022. English. ⟨NNT : 2022UPSLS071⟩. ⟨tel-04186742⟩
• 
  Thibault Kervarrec, Anne Tallet, Nicolas Macagno, Arnaud de la Fouchardière, Daniel Pissaloux, et al.. Sweat Gland Tumors Arising on Acral Sites: A Molecular Survey. American Journal of Surgical Pathology, 2023, 47 (10), pp.1096-1107. ⟨10.1097/PAS.0000000000002098⟩. ⟨hal-04183882⟩
• 
  Félix Raimundo, Laetitia Meng-Papaxanthos, Céline Vallot, Jean-Philippe Vert. Machine learning for single-cell genomics data analysis. Current Opinion in Systems Biology, 2021, 26, pp.64-71. ⟨10.1016/j.coisb.2021.04.006⟩. ⟨hal-03510346⟩
• 
  Sandra Curras-Alonso, Juliette Soulier, Thomas Defard, Christian Weber, Sophie Heinrich, et al.. An interactive murine single-cell atlas of the lung responses to radiation injury. Nature Communications, 2023, 14 (1), pp.2445. ⟨10.1038/s41467-023-38134-z⟩. ⟨hal-04092147⟩

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