R. Agha and A. Quesada, Oligopeptides as biomarkers of cyanobacterial subpopulations. Toward an understanding of their biolgical role, Toxins, vol.6, pp.1929-1950, 2014.

C. T. Bishop, E. F. Anet, and P. R. Gorham, Isolation and identification of the fast-death factor in Microcystis aeruginosa NRC-1, Can. J. Biochem. Physiol, vol.37, pp.453-471, 1959.

P. Boudreau, E. Monroe, S. Mehrotra, S. Desfor, A. Korabeynikov et al., Expanding the described metabolome of the marine cyanobacterium Moorea producens JHB through orthogonal natural products workflows, PLoS One, vol.10, 2015.

E. Briand, M. Bomans, C. Quiblier, M. Saleçon, H. et al., Evidence of the cost of the production of Microcystins by Microcystis aeruginosa under different light and nitrate environmental conditions, PLoS One, vol.7, p.29981, 2012.

E. Briand, M. Bormans, M. Gugger, P. C. Dorrestein, and W. Gerwick, Changes in secondary metabolic profiles of Microcystis aeruginosa strains in response to intraspecific interactions, Environ. Microbiol, vol.18, pp.384-400, 2016.
URL : https://hal.archives-ouvertes.fr/hal-01154635

E. Briand, J. Humbert, K. Tambosco, M. Bormans, and W. Gerwick, Role of bacteria in the production and degradation of Microcystis cyanopeptides, vol.5, pp.469-478, 2016.
URL : https://hal.archives-ouvertes.fr/hal-01281731

E. Briand, N. Escoffier, C. Straub, M. Sabart, C. Quiblier et al., Spatiotemporal changes in the genetic diversity of a bloom-forming Microcystis aeruginosa (cyanobacteria) population, ISME J, vol.3, pp.419-429, 2009.
URL : https://hal.archives-ouvertes.fr/hal-00476872

C. C. Carey, B. W. Ibelings, E. P. Hoffmann, D. P. Hamilton, and J. D. Brookes, Eco-physiological adaptations that favour freshwater cyanobacteria in a changing climate, Water Res, vol.46, pp.1394-1407, 2012.

W. Carmichael, Cyanobacterial harmful algal blooms: state of the science and research needs, Adv. Exp. Med. Biol, vol.619, pp.831-853, 2008.

A. Catherine, C. Bernard, L. Spoof, and M. Bruno, Microcystins and nodularins, Handbook of Cyanobacterial Monitoring and Cyanotoxin Analysis, 2017.

G. A. Codd, L. F. Morrison, and J. S. Metcalf, Cyanobacterial toxins: risk management for health protection, Toxicol. Appl. Pharmacol, vol.203, pp.264-272, 2005.

E. Dittmann, M. Gugger, K. Sivonen, and D. P. Fewer, Natural product biosynthetic diversity and comparative genomics of the cyanobacteria, Trends Microbiol, vol.23, pp.642-652, 2015.
URL : https://hal.archives-ouvertes.fr/pasteur-01381738

N. Gan, Y. Xiao, L. Zhu, Z. Wu, J. Liu et al., The role of microcystins in maintaining colonies of bloom-forming Microcystis spp, Environ. Microbiol, vol.14, pp.730-742, 2012.

M. Gugger and L. Hoffmann, Polyphyly of true branching cyanobacteria (Stigonematales), Int. J. Syst. Evol. Microbiol, vol.54, pp.349-357, 2004.

M. Gugger, C. Lyra, I. Suominen, I. Tsitko, J. Humbert et al., Cellular fatty acids as chemotaxonomic makers of the genera Anabaena, Aphanizomenon, Microcystis, Nostoc and Planktothrix, Int. J. Syst. Evol. Microbiol, vol.52, pp.1007-1015, 2002.

A. Guljamow, M. Kreische, K. Ishida, A. Liaimer, B. Altermark et al., High-density cultivation of terrestrial Nostoc strains leads to reprogramming of secondary metabolome, Appl. Environ. Microbiol, vol.83, pp.1510-1527, 2017.

S. Haande, A. Ballot, T. Rohrlack, J. Fastner, C. Wiedner et al., Diversity of Microcystis aeruginosa isolates (Chroococcales, Cyanobacteria) from East-African water bodies, Arch. Microbiol, vol.188, pp.15-25, 2007.

M. J. Harke, J. G. Jankowiak, B. K. Morrell, and C. J. Gobler, Transcriptomic responses in the bloom-forming Cyanobacterium Microcystis induced during exposure to zooplankton, Appl. Environ. Microbiol, vol.83, pp.2832-2848, 2017.

M. J. Harke, M. M. Steffen, C. J. Gobler, T. G. Otten, S. W. Wilhelm et al., A review of the global ecology, genomics, and biogeography of the toxic cyanobacterium, Microcystis spp, Harmful Algae, vol.54, pp.4-20, 2016.

A. Holland and S. Kinnear, Interpreting the possible ecological role(s) of cyanotoxins: compounds for competitive advantage and/or physiological aide?, Mar. Drugs, vol.11, pp.2239-2258, 2013.

J. Humbert, V. Barbe, A. Latifi, M. Gugger, A. Camteau et al., A tribute to disorder in the genome of the bloom-forming freshwater cyanobacterium Microcystis aeruginosa, PLoS One, vol.8, p.70747, 2013.
URL : https://hal.archives-ouvertes.fr/bioemco-00851371

J. Humbert, D. Duris-latour, B. Le-berre, H. Giraudet, and M. J. Salençon, Genetic diversity in Microcystis populations of a French storage reservoir assessed by sequencing of 16S-23S rRNA intergenic spacer, Microbiol. Ecol, vol.49, pp.308-314, 2005.

I. Iteman, R. Rippka, N. Tandeau-de-marsac, and M. Herdman, Comparison of conserved structural and regulatory domains within divergent 16SrRNA-23S rRNA spacer sequences of cyanobacteria, Microbiology, vol.146, pp.1275-1286, 2000.

J. Ivanisevic, O. Thomas, C. Lejeune, P. Chavaldonné, and T. Perez, Metabolic fingerprinting as an indicator of biodiversity: towards understanding inter-specific relationships among Homoscleromorpha sponges, Metabolomics, vol.7, pp.289-304, 2011.
URL : https://hal.archives-ouvertes.fr/hal-01801749

J. Komárek, A polyphasic approach for the taxonomy of cyanobacteria: principles and applications, Eur. J. Phycol, vol.51, pp.346-353, 2016.

Y. Liu, Y. Xu, Z. Wang, P. Xiao, G. Yu et al., Dominance and succession of Microcystis genotypes and morphotypes in Lake Taihu, a large and shallow freshwater lake in China, Environ. Pollut, vol.219, pp.399-408, 2016.

J. Ma, B. Qin, H. W. Paerl, J. D. Brookes, N. S. Hall et al., The persistence of cyanobacterial (Microcystis spp.) blooms throughout winter in Lake Taihu, China. Limnol. Oceanogr, vol.61, pp.711-722, 2016.

J. Martins, M. L. Saker, C. Moreira, M. Welker, J. Fastner et al., Peptide diversity in strains of the cyanobacterium Microcystis aeruginosa isolated from Portuguese water supplies, Appl. Microbiol. Biotechnol, vol.82, pp.951-961, 2009.

J. Martins and V. Vasconcelos, Cyanobactins from cyanobacteria: current genetic and chemical state of knowledge, Mar. Drugs, vol.13, pp.6910-6946, 2015.

S. Otsuka, S. Suda, R. Li, S. Matsumoto, and M. M. Watanabe, Morphological variability of colonies of Microcystis morphospecies in culture, J. Gen. Appl. Microbiol, vol.46, pp.39-50, 2000.

S. Otsuka, S. Suda, R. Li, and M. Watanabe, Phylogenetic relationships between toxic and non-toxic strains of the genus Microcystis based on 16S to 23S internal transcribed spacer sequence, FEMS Microbiol. Lett, vol.172, pp.15-21, 1999.

S. Otsuka, S. Suda, S. Shibata, H. Oyaizu, S. Matsumoto et al., A proposal for the unification of five species of the cyanobacterial genus Microcystis Kützing ex Lemmermann 1907 under the rules of the bacteriological code, Int. J. Syst. Evol. Microbiol, vol.51, pp.873-879, 2001.

H. W. Paerl, Mitigating toxic planktonic cyanobacterial blooms in aquatic ecosystems facing increasing anthropogenic and climatic pressures, Toxins, vol.10, p.76, 2018.

H. W. Paerl, N. S. Hall, and E. S. Calandrino, Controlling harmful cyanobacterial blooms in a world experiencing anthropogenic and climaticinduced change, Sci. Total Environ, vol.409, pp.1739-1745, 2011.

C. Pancrace, K. Ishida, E. Briand, D. G. Pichi, A. R. Weiz et al., Unique biosynthetic pathway in bloom-forming cyanobacterial genus Microcystis jointly assembles cytotoxic aeruginoguanidines and microguanidines, ACS Chem. Biol, vol.14, pp.67-75, 2018.
URL : https://hal.archives-ouvertes.fr/pasteur-02044790

L. Pearson, T. Mihali, M. Moffitt, R. Kellmann, and B. Neilan, On the chemistry, toxicology and genetics of the cyanobacterial toxins, microcystin, nodularin, saxitoxin and cylindrospermopsin, Mar. Drugs, vol.8, pp.1650-1680, 2010.

L. ?ejnohová and B. Mar?álek, Microcystis, Ecology of Cyanobacteria II: Their Diversity in Space and Time, pp.195-228, 2012.

P. M. Shih, D. Wu, A. Latifi, S. D. Axen, D. P. Fewer et al., Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing, Proc. Natl. Acad. Sci. U.S.A, vol.110, pp.1053-1058, 2013.
URL : https://hal.archives-ouvertes.fr/pasteur-01389305

K. Sivonen, N. Leikoski, D. P. Fewer, and J. Jokela, , 2010.

, Cyanobactins-ribosomal cyclic peptides produced by cyanobacteria

, Appl. Microbiol. Biotechnol, vol.86, pp.1213-1225

M. M. Steffen, Z. Li, T. C. Effler, L. J. Hauser, G. L. Boyer et al., Comparative metagenomics of toxic freshwater cyanobacteria bloom communities on two continents, PLoS One, vol.7, p.44002, 2012.

A. Sukenik, A. Quesada, and N. Salmaso, Global expansion of toxic and non-toxic cyanobacteria: effect on ecosystem functioning, Biodivers. Conserv, vol.4, pp.889-908, 2015.

L. W. Sun, W. J. Jiang, H. Sato, M. Kawachi, and X. W. Lu, Rapid classification and identification of Microcystis strains using MALDI-TOF MS and polyphasic analysis, PLoS One, vol.11, 2016.

D. Tillett, D. L. Parker, and B. A. Neilan, Detection of toxigenicity by a probe for the microcystin synthetase A gene (mcyA) of the cyanobacterial genus Microcystis: comparison of toxicities with 16S rRNA and phycocyanin operon (phycocyanin intergenic spacer) phylogenies, Appl. Envir. Microbiol, vol.67, pp.2810-2818, 2001.

L. Tonk, P. M. Visser, G. Christiansen, E. Dittmann, E. O. Snelder et al., The microcystin composition of the cyanobacterium Planktothrix agardhii changes towards a more toxic variant with increasing light intensity, Appl. Environ. Microbiol, vol.71, pp.5177-5181, 2005.

L. Tonk, M. Welker, J. Huisman, and P. M. Visser, Production of cyanopeptolins, anabaenopeptins, and microcystins by the harmful cyanobacteria Anabaena 90 and Microcystis PCC 7806, Harmful Algae, vol.8, pp.219-224, 2009.

L. Via-ordorika, J. Fastner, R. Kurmayer, M. Hisbergues, E. Dittmann et al., Distribution of microcystin-producing and nonmicrocystin-producing Microcystis sp. in European freshwater bodies: detection of microcystins and microcystin genes in individual colonies, Syst. Appl. Microbiol, vol.27, pp.592-602, 2004.

H. Wang, D. P. Fewer, L. Holm, L. Rouhiainen, and K. Sivonen, Atlas of nonribosomal peptide and polyketide biosynthetic pathways reveals common occurrence of nonmodular enzymes, Proc. Natl. Acad. Sci. U.S.A, vol.111, pp.9259-9264, 2014.

M. Welker, M. Brunke, K. Preussel, I. Lippert, and H. Von-döhren, Diversity and distribution of Microcystis (cyanobacteria) oligopeptide chemotypes from natural communities studies by singlecolony mass spectrometry, Microbiology, vol.150, pp.1785-1796, 2004.

M. Welker, E. Dittmann, V. Döhren, and H. , Cyanobacteria as a source of natural products, Methods Enzymol, vol.517, pp.23-46, 2012.

M. Welker, L. Ejnohová, D. Némethová, H. Von-döhren, J. Jarkovsky et al., Seasonal shifts in chemotype composition of Microcystis sp. communities in the pelagial and the sediment of a shallow reservoir, Limnol. Oceanogr, vol.52, pp.609-619, 2007.

M. Welker, B. Mar?álek, L. ?ejnohová, and H. Von-döhren, Detection and identification of oligopeptides in Microcystis (cyanobacteria) colonies: toward an understanding of metabolic diversity, Peptides, vol.27, pp.2090-2103, 2006.

M. Welker, V. Döhren, and H. , Cyanobacterial peptides -nature's own combinatorial biosynthesis, FEMS Microbiol. Rev, vol.30, pp.530-563, 2006.

B. A. Whitton, Ecology of Cyanobacteria II, Ecology of Cyanobacteria II: Their Diversity in Space and Time, 2012.

J. Y. Yang, L. M. Sanchez, C. M. Rath, X. Liu, P. D. Boudreau et al., Molecular networking as a dereplication strategy, J. Nat. Prod, vol.76, pp.1686-1699, 2013.

A. Zak and A. Kosakowska, Cyanobacterial and microalgal bioactive compounds-the role of secondary metabolites in allelopathic interactions, Oceanol. Hydrobiol. Stud, vol.45, pp.131-143, 2016.

R. W. Zurawell, H. Chen, J. M. Burke, and E. E. Prepas, Hepatotoxic cyanobacteria: a review of the biological importance of microcystins in freshwater environments, J. Toxicol. Environ. Health. B. Crit. Rev, vol.8, pp.1-37, 2005.

G. Zwart, W. D. Hiorns, B. A. Methe, M. P. Van-agterveld, R. Huismans et al., Nearly identical 16S rRNA sequences recovered from lakes in North America and Europe indicate the existence of clades of globally distributed freshwater bacteria, Syst. Appl. Microbiol, vol.21, issue.98, pp.80067-80069, 1998.